CDS

Accession Number TCMCG066C15417
gbkey CDS
Protein Id XP_034590681.1
Location complement(join(10578125..10578338,10578781..10578837,10578967..10579163,10579968..10580036,10580136..10580279,10580777..10581010))
Gene LOC117852621
GeneID 117852621
Organism Setaria viridis

Protein

Length 304aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034734790.1
Definition THO complex subunit 4D-like isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description C-terminal duplication domain of Friend of PRMT1
KEGG_TC -
KEGG_Module M00406        [VIEW IN KEGG]
M00430        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12881        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACATCTTTGGACGTTCCACTCGATGATTTGATTAAGAGCAGAAATGGGAGGGGAAGGGGAAGAGGCAGGGGACAAGGAGGGGGTCGAGGCAGAGGTGATGGTCAAAGATTGGCCCGTGGATCATGGCGTGGGCGTGGTACTGGCACCTTCCGTGGAAGGGGACTTGGGGTGCCTTCACGAAGGCCACTTGGTGTTAATACTCGATCCTCATCGTTTGCTATTGCCAAGTCATTCAATAAAGCAAAGGATTTTGTGTGGAGGCATGATCTGTTTGAGGATAGCATGGTGGCAGCTGGGCTTTCTGGGATAGAATCTGGTACAAAGTTGTACATTTCAAACTTGCACTATGGGGTGACCAGGGAAGATATAAAGGAGCTTTTTTCAGAAATGGGTCATTTGAAGCACTGTGCTGTTCACTATGACAATAATAGACACCCAACTGGTTCTGCTGAGGTGATATTCACCAGGAGAAGCGAAGCTCTTGCGGCACTGAAACGATATAATAATGTGCGCCTTGATGGGAAGGCGATGAAGATTGAAGTGATAGGAGCAGATTTGGGTCTTTCTGCTGCTGCCACACCCCGGATTAGTGTTGTTCCTGGTGCAAGGGGAAGAGGACAGAGAGAAGTTGTAATGATGCCTGGTGGGAATGGGTTTGGTCGAGGTACAGCTGGCTCATCTAATTCACTTCCCGGGTGGAAGCGTGGAGGTTTTGCTCAAAGAGGGGGAGGACAAGTGCGCGGGGGTTTTACTCAAAGAGGGGGAAGACAAGTTCGCGGGCGTGGGCGTAGTAGCTTTGGCAGGGGCCGTGGACGTGGCTATGTGCGCAAGGGAAATGTTGAGAAATCAGCCGACCAATTGGACAAGGAGCTTGACAACTACCATTCTGGTGCGATGAATGTTGACTAA
Protein:  
MATSLDVPLDDLIKSRNGRGRGRGRGQGGGRGRGDGQRLARGSWRGRGTGTFRGRGLGVPSRRPLGVNTRSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHYGVTREDIKELFSEMGHLKHCAVHYDNNRHPTGSAEVIFTRRSEALAALKRYNNVRLDGKAMKIEVIGADLGLSAAATPRISVVPGARGRGQREVVMMPGGNGFGRGTAGSSNSLPGWKRGGFAQRGGGQVRGGFTQRGGRQVRGRGRSSFGRGRGRGYVRKGNVEKSADQLDKELDNYHSGAMNVD